SOFT : CATCH
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Site du soft: https://github.com/broadinstitute/catch
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LICENSE:
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MIT

See software documentation for more informations.

Location: /usr/local/bioinfo/src/CATCH
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Load binaries and environment:
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-> Version v1.5.2

#Need Miniforge
module load devel/Miniforge/Miniforge3
module load bioinfo/CATCH/1.5.2

To unload module, unload  in order:

module unload bioinfo/CATCH/1.5.2
module unload devel/Miniforge/Miniforge3

Warning! By default 4 cpus are used on the node. Don't forget to adjust t option of ntJoin command and --cpus-per-task option for Slurm.

Example directory for use on cluster:
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/usr/local/bioinfo/src/CATCH/example_on_cluster

To submit: sbatch test_catch-v1.5.2.sh

See software documentation and our FAQ (https://vm-genoword.toulouse.inrae.fr/FAQ) for more informations.