SOFT : CRISPRme
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Site du soft: https://github.com/pinellolab/CRISPRme
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LICENSE:
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CRISPRme is distributed under a dual-license model: 
- Free for Academic Use: AGPL-3.0
- Commercial Use : need a commercial license.

See software documentation for more informations.

Location: /usr/local/bioinfo/src/CRISPRme
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Load binaries and environment:
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-> Version v2.1.9

#Need Miniforge
module load devel/Miniforge/Miniforge3
module load bioinfo/CRISPRme/2.1.9

To unload module, unload  in order:

module unload bioinfo/CRISPRme/2.1.9
module unload devel/Miniforge/Miniforge3

Warning! By default 8 cpus are used on the node. Don't forget to adjust --thread option of crisprme.py command and --cpus-per-task option for Slurm.

Example directory for use on cluster:
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/usr/local/bioinfo/src/CRISPRme/example_on_cluster

To submit: sbatch test_CRISPRme-v2.1.9.sh

See software documentation and our FAQ (https://vm-genoword.toulouse.inrae.fr/FAQ) for more informations.