SOFT : ClinSV
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Site du soft: https://github.com/KCCG/ClinSV
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LICENSE:
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Only FOR RESEARCH AND EDUCATION. See https://github.com/KCCG/ClinSV/blob/master/LICENCE.md

See software documentation for more informations.

Location: /usr/local/bioinfo/src/ClinSV
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Load binaries and environment:
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-> Version v0.9


#Need Singularity
module load containers/singularity/3.9.9

module load bioinfo/ClinSV/0.9

Refdata path: /usr/local/bioinfo/src/ClinSV/ClinSV-v0.9/refdata-b37/clinsv/refdata-b37/

Warning! By default 15 cpu are used on the node. Don't forget to adjust --cpus-per-task option for Slurm.


Example directory for use on cluster:
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/usr/local/bioinfo/src/ClinSV/example_on_cluster

To submit: sbatch test_ClinSV-v0.9.sh 

See software documentation and our FAQ (http://bioinfo.genotoul.fr/index.php/faq/) for more informations.