SOFT : Computel
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Site du soft: https://github.com/lilit-nersisyan/computel
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LICENSE:
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GPL-v3

See software documentation for more informations.

Location: /usr/local/bioinfo/src/Computel
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Load binaries and environment:
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-> Version v1.3.1

#Need R, samtools, bowtie2-2.0.7, picard-tools-1.88
module load statistics/R/4.2.2 bioinfo/samtools/1.21 bioinfo/bowtie/2.0.7 bioinfo/picard-tools/1.88

module load bioinfo/Computel/1.3.1

Warning! By default 4 cpu are used on the node. Don't forget to adjust -proc  option of  computel.sh commands and scripts and --cpus-per-task option for Slurm.

Example directory for use on cluster:
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/usr/local/bioinfo/src/Computel/example_on_cluster

To submit: sbatch test_computel-1.3.1.sh 

See software documentation and our FAQ (http://bioinfo.genotoul.fr/index.php/faq/) for more informations.