SOFT : Enformer
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Site du soft: https://github.com/google-deepmind/deepmind-research/tree/master/enformer
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LICENSE:
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Apache-2.0 license 

See software documentation for more informations.

Location: /usr/local/bioinfo/src/Enformer
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Load binaries and environment:
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-> Version 11c2ab5

#Need GPU. To submit on gpuq, see FAQ: https://vm-genoword.toulouse.inrae.fr/FAQ/faq/job-submission/#how-to-use-gpu-node -> How to use GPU node

#Need Cuda
module load nvidia/nvhpc/22.11

module load bioinfo/Enformer/11c2ab5

Models path: /usr/local/bioinfo/src/Enformer/enformer-11c2ab5/models

Example directory for use on cluster:
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/usr/local/bioinfo/src/Enformer/example_on_cluster

To submit: sbatch test_enformer-11c2ab5.sh (only test enformer import)

See software documentation and our FAQ (http://bioinfo.genotoul.fr/index.php/faq/) for more informations.