SOFT : GEM
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Site du soft: https://groups.csail.mit.edu/cgs/gem/
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LICENSE:
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NC

See software documentation for more informations.

Location: /usr/local/bioinfo/src/GEM
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Load binaries and environment:
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-> Version v3.4

module load bioinfo/GEM/3.4

java -Xmx10G -jar $GEM_HOME/gem.jar  ...

Warning! By default all cpu are used on the node. Don't forget to adjust --t option of gem.jar command and --cpus-per-task option for Slurm.

Example directory for use on cluster:
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/usr/local/bioinfo/src/GEM/example_on_cluster

To submit: sbatch test_gem-v3.4.sh 

See software documentation and our FAQ (http://bioinfo.genotoul.fr/index.php/faq/) for more informations.