SOFT : Hairsplitter
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Site du soft: https://github.com/rolandfaure/hairsplitter
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LICENSE:
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GPL-v3

See software documentation for more informations.

Location: /usr/local/bioinfo/src/Hairsplitter
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Load binaries and environment:
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-> Version v1.9.18

#Need Python, minimap2,samtools, racon (or medaka), raven  minigrap gcc-12.2.0
module load devel/python/Python-3.11.1 bioinfo/Minimap/2-2.28 bioinfo/samtools/1.21 bioinfo/Racon/1.4.3 bioinfo/Raven/1.8.3 bioinfo/Minigraph/0.21  compilers/gcc/12.2.0

module load bioinfo/Hairsplitter/1.9.18

Example directory for use on cluster:
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/usr/local/bioinfo/src/Hairsplitter/example_on_cluster

To submit: sbatch test_Hairsplitter-v1.9.18.sh 

See software documentation and our FAQ (http://bioinfo.genotoul.fr/index.php/faq/) for more informations.