SOFT : IGV
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Site du soft: https://software.broadinstitute.org/software/igv/
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LICENSE:
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MIT

See software documentation for more informations.

Location: /usr/local/bioinfo/src/IGV
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Load binaries and environment:
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-> Version v2.16.1

If not already exist, setup your default user directory:
mkdir ~/work/igv
ln -s ~/work/igv ~/igv

#Must use interactive mode (see below)
#Need JDK > 11
module load devel/java/17.0.6

module load bioinfo/IGV/2.16.1

igv.sh

Help for use
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#Must use interactive mode:
INTERACTIVE with X11 forwarding
For the first time, create your public key as below (onto genologin server)
$ ssh-keygen (and "Enter" for all question)
$cat .ssh/id_rsa.pub >> .ssh/authorized_keys

~ $ srun --mem=4G --x11 --pty bash
~ $ module load devel/java/17.0.6
~ $ module load bioinfo/IGV/2.16.1
~ $ igv.sh


See software documentation and our FAQ (http://bioinfo.genotoul.fr/index.php/faq/) for more informations.