SOFT : ITSx
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Site du soft: https://microbiology.se/software/itsx/
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LICENSE:
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GPL-v3

See software documentation for more informations.

Location: /usr/local/bioinfo/src/ITSx
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Load binaries and environment:
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-> Version v1.1.3

#Need HMMER
module load bioinfo/HMMER/3.2.1

module load bioinfo/ITSx/1.1.3

db path (-p option): /usr/local/bioinfo/src/ITSx/ITSx_1.1.3/ITSx_db/HMMs

Example directory for use on cluster:
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/usr/local/bioinfo/src/ITSx/example_on_cluster 

To submit: sbatch test_ITSx_1.1.3.sh 

See software documentation and our FAQ (http://bioinfo.genotoul.fr/index.php/faq/) for more informations.