SOFT : MetaCHIP
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Site du soft: https://github.com/songweizhi/MetaCHIP
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LICENSE:
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AGPL-3.0 license 

See software documentation for more informations.

Location: /usr/local/bioinfo/src/MetaCHIP
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Load binaries and environment:
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-> Version v1.10.13

# Need R,Prodigal, HMMER 3, MAFFT, BLAST+, FastTree.
module load statistics/R/4.2.2 bioinfo/Prodigal/2.6.3 bioinfo/HMMER/3.4 bioinfo/MAFFT/7.505 bioinfo/NCBI_Blast+/2.10.0+ bioinfo/FastTree/2.1.11

module load bioinfo/MetaCHIP/1.10.13

Example directory for use on cluster:
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/usr/local/bioinfo/src/MetaCHIP/example_on_cluster

To submit: sbatch test_MetaCHIP-1.10.13.sh

See software documentation and our FAQ (https://vm-genoword.toulouse.inrae.fr/FAQ) for more informations.