SOFT : PlantiSMASH
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Site du soft: https://github.com/plantismash/plantismash
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LICENSE:
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AGPL-3.0 license 

See software documentation for more informations.

Location: /usr/local/bioinfo/src/PlantiSMASH
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Load binaries and environment:
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-> Version v2.0-beta2

#Need Miniforge
module load devel/Miniforge/Miniforge3
module load bioinfo/PlantiSMASH/2.0-beta2

To unload module, unload  in order:

module unload bioinfo/PlantiSMASH/2.0-beta2
module unload devel/Miniforge/Miniforge3

#Warning! By default all (128) pus are used on the node. Don't forget to adjust --cpusoption of run_antismash.py  command and --cpus-per-task option for Slurm.

Example directory for use on cluster:
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/usr/local/bioinfo/src/PlantiSMASH/example_on_cluster

To submit: sbatch test_plantismash-v2.0-beta2.sh

See software documentation and our FAQ (http://bioinfo.genotoul.fr/index.php/faq/) for more informations.