SOFT : Promotech
------

Site du soft: https://github.com/BioinformaticsLabAtMUN/PromoTech
-------------

LICENSE:
--------

GPL-v3

See software documentation for more informations.

Location: /usr/local/bioinfo/src/Promotech
---------

Load binaries and environment:
------------------------------

-> Version v1.0

#Need Miniconda
module load devel/Miniconda/Miniconda3
module load bioinfo/Promotech/1.0

To unload module, unload  in order:

module unload bioinfo/Promotech/1.0
module unload devel/Miniconda/Miniconda3

Models path: /usr/local/bioinfo/src/Promotech/Promotech-v1.0/models

Do symbolic link to models in your working directory:
ln -s /usr/local/bioinfo/src/Promotech/Promotech-v1.0/models .

#Need GPU. To submit on gpuq, see FAQ:  https://vm-genoword.toulouse.inrae.fr/FAQ/faq/job-submission/#how-to-use-gpu-node -> How to use GPU node

Example directory for use on cluster:
-------------------------------------

/usr/local/bioinfo/src/Promotech/example_on_cluster

To submit: sbatch test_Promotech-v1.0.sh

See software documentation and our FAQ (http://bioinfo.genotoul.fr/index.php/faq/) for more informations.