SOFT : RAxML-NG
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Site du soft: https://github.com/amkozlov/raxml-ng
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LICENSE:
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AGPL-v3

See software documentation for more informations.

Location: /usr/local/bioinfo/src/RAxML-NG
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Load binaries and environment:
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-> Version V1.2.0

module load bioinfo/RAxML-NG/1.2.0

or to use MPI version:

#MPI mode
module load mpi/openmpi/4.1.4

module load bioinfo/RAxML-NG/1.2.0-MPI

#Warning: default threads are 32. Don't forget to adjust --threads option of raxml-ng-mpi and --cpus-per-task option of sbatch)
#In  fact, raxml-ng use 2 threads + threads fixed in --threads option.

Example directory for use on cluster:
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/usr/local/bioinfo/src/RAxML-NG/example_on_cluster

To submit: sbatch test_RAxML-NG_v1.2.0-MPI.sh

See software documentation and our FAQ (http://bioinfo.genotoul.fr/index.php/faq/) for more informations.