SOFT : RepeatModeler
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Site du soft: http://www.repeatmasker.org/ and https://github.com/Dfam-consortium/RepeatModeler
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LICENSE:
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Open Software License v. 2.1. See https://github.com/Dfam-consortium/RepeatModeler/blob/master/LICENSE

See software documentation for more informations.

Location: /usr/local/bioinfo/src/RepeatModeler
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Load binaries and environment:
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-> Version v2.0.4

#Need Python-3.6.3 for Repeatmasker
module load devel/python/Python-3.6.3

module load bioinfo/RepeatModeler/2.0.4

-> Version v2.0.6

#Need Python-3.6.3 for Repeatmasker
module load devel/python/Python-3.6.3

module load bioinfo/RepeatModeler/2.0.6

-> Version v2.0.7

#Need Python-3.6.3 for Repeatmasker
module load devel/python/Python-3.6.3

module load bioinfo/RepeatModeler/2.0.7


Example directory for use on cluster:
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/usr/local/bioinfo/src/RepeatModeler/example_on_cluster

To submit: sbatch test_RepeatModeler-2.0.4.sh

See software documentation and our FAQ (http://bioinfo.genotoul.fr/index.php/faq/) for more informations.