SOFT : SAMap
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Site du soft: https://github.com/atarashansky/SAMap
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LICENSE:
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MIT

See software documentation for more informations.

Location: /usr/local/bioinfo/src/SAMap
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Load binaries and environment:
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-> Version 99c70f0

#Need Miniconda
module load devel/Miniconda/Miniconda3
module load bioinfo/SAMap/99c70f0

#Need Blast+-v2.9.0
module load bioinfo/NCBI_Blast+/2.9.0+

To unload module, unload  in order:

module unload bioinfo/SAMap/99c70f0
module unload devel/Miniconda/Miniconda3

Example directory for use on cluster:
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/usr/local/bioinfo/src/SAMap/example_on_cluster 

To submit: sbatch test_SAMap-99c70f0.sh (Just test import SAMAP and Blast version)

See software documentation and our FAQ (http://bioinfo.genotoul.fr/index.php/faq/) for more informations.