SOFT : SCCmecFinder
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Site du soft: https://bitbucket.org/genomicepidemiology/sccmecfinder
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LICENSE:
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NC

See software documentation for more informations.

Location: /usr/local/bioinfo/src/SCCmecFinder
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Load binaries and environment:
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-> Version v1.2.1

#Need Python2
module load devel/python/Python-2.7.18

module load bioinfo/SCCmecFinder/1.2.1

Database: /usr/local/bioinfo/src/SCCmecFinder/sccmecfinder-1.2.1/sccmecfinder_db

Example directory for use on cluster:
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/usr/local/bioinfo/src/SCCmecFinder/example_on_cluster

To submit: sbatch test_sccmecfinder-1.2.1.sh  (No data example found, so just help option)

See software documentation and our FAQ (http://bioinfo.genotoul.fr/index.php/faq/) for more informations.