SOFT : SqueezeMeta
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Site du soft: https://github.com/jtamames/SqueezeMeta
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LICENSE:
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GPL-v3

See software documentation for more informations.

Location: /usr/local/bioinfo/src/SqueezeMeta
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Load binaries and environment:
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-> Version v1.6.4

#Need Miniconda
module load devel/Miniconda/Miniconda3
module load bioinfo/SqueezeMeta/1.6.4

To unload module, unload  in order:

module unload bioinfo/SqueezeMeta/1.6.4
module unload devel/Miniconda/Miniconda3

Warning! By default 12 cpu are used on the node. Don't forget to adjust  -t option of SqueezeMeta.pl and --cpus-per-task option for Slurm.

Example directory for use on cluster:
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/usr/local/bioinfo/src/SqueezeMeta/example_on_cluster

To submit: sbatch test_SqueezeMeta-v1.6.4.sh 

See software documentation and our FAQ (http://bioinfo.genotoul.fr/index.php/faq/) for more informations.