SOFT : TEsorter
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Site du soft: https://github.com/zhangrengang/TEsorter
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LICENSE:
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GPL-v3

See software documentation for more informations.

Location: /usr/local/bioinfo/src/TEsorter
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Load binaries and environment:
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-> Version v1.4.6

#Need Miniconda
module load devel/Miniconda/Miniconda3
module load bioinfo/TEsorter/1.4.6

To unload module, unload  in order:

module unload bioinfo/TEsorter/1.4.6
module unload devel/Miniconda/Miniconda3

-> Version v1.4.7

#Need Miniconda
module load devel/Miniconda/Miniconda3
module load bioinfo/TEsorter/1.4.7

To unload module, unload  in order:

module unload bioinfo/TEsorter/1.4.7
module unload devel/Miniconda/Miniconda3

Warning! By default 4 cpus are used on the node. Don't forget to adjust -p option of TEsorter command and --cpus-per-task option for Slurm.

Example directory for use on cluster:
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/usr/local/bioinfo/src/TEsorter/example_on_cluster

To submit: sbatch test_TEsorter-v1.4.6.sh

See software documentation and our FAQ (http://bioinfo.genotoul.fr/index.php/faq/) for more informations.