SOFT : TrEMOLO
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Site du soft: https://github.com/DrosophilaGenomeEvolution/TrEMOLO
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LICENSE:
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CeCill-C and GPLv3

See software documentation for more informations.

Location: /usr/local/bioinfo/src/TrEMOLO
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Load binaries and environment:
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-> Version v2.5.4b

#Need Singularity
module load containers/singularity/3.9.9

module load bioinfo/TrEMOLO/2.5.4b

singularity exec -B -B /usr/local/bioinfo/src/TrEMOLO/ -B /path_to_your_working_directory $TREMOLO_HOME/TrEMOLO.simg snakemake --snakefile $TREMOLO_HOME/run.snk ...

Example directory for use on cluster:
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/usr/local/bioinfo/src/TrEMOLO/example_on_cluster

To submit: sbatch test_TrEMOLO-v2.5.4b.sh 

See software documentation and our FAQ (http://bioinfo.genotoul.fr/index.php/faq/) for more informations.