SOFT : TrimGalore
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Site du soft: http://www.bioinformatics.babraham.ac.uk/projects/trim_galore/
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LICENSE:
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GPL-v3

See software documentation for more informations.

Location: /usr/local/bioinfo/src/TrimGalore
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Load binaries and environment:
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-> Version v0.4.5

#Need ptyhon (cutadapt) and FastQC
module load devel/python/Python-2.7.18 bioinfo/FastQC/0.12.1

module load bioinfo/TrimGalore/0.4.5


-> Version v0.6.10

#Need cutadapt (in Python-3.11.1) and FastQC
module load devel/python/Python-3.11.1 bioinfo/FastQC/0.12.1

module load bioinfo/TrimGalore/0.6.10

Example directory for use on cluster:
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/usr/local/bioinfo/src/TrimGalore/example_on_cluster

To submit: sbatch test_TrimGalore-0.6.10.sh 

See software documentation and our FAQ (http://bioinfo.genotoul.fr/index.php/faq/) for more informations.