SOFT : bowtie
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Site du soft: https://bowtie-bio.sourceforge.net/index.shtml http://bowtie-bio.sourceforge.net/bowtie2/index.shtml https://github.com/BenLangmead/bowtie2
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LICENSE:
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GPL-v3

See software documentation for more informations.

Location: /usr/local/bioinfo/src/bowtie
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Load binaries and environment:
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-> Version v1.2.1.1

#Need Python2
module load devel/python/Python-2.7.18

module load bioinfo/bowtie/1.2.1.1

-> Version v2.0.7

module load bioinfo/bowtie/2.0.7

-> Version v2.3.5.1

module load bioinfo/bowtie/2.3.5.1

-> Version v2.5.1

#Need Python-3.9
module load devel/python/Python-3.9.18

module load bioinfo/bowtie/2.5.1

-> Version v2.5.4

#Need Python-3.9
module load devel/python/Python-3.9.18

module load bioinfo/bowtie/2.5.4

Example directory for use on cluster:
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/usr/local/bioinfo/src/bowtie/example_on_cluster

To submit: sbatch test_bowtie2-2.3.5.1.sh

See software documentation and our FAQ (http://bioinfo.genotoul.fr/index.php/faq/) for more informations.