SOFT : circfull
------

Site du soft: https://github.com/yangence/circfull
-------------

LICENSE:
--------

GPL-v3

See software documentation for more informations.

Location: /usr/local/bioinfo/src/circfull
---------

Load binaries and environment:
------------------------------

-> Version b61efc0 (0.1.0 git)

#Need Miniconda
module load devel/Miniconda/Miniconda3
module load bioinfo/circfull/b61efc0

To unload module, unload  in order:

module unload bioinfo/circfull/b61efc0
module unload devel/Miniconda/Miniconda3

(samtools bedtools porechop minimap2 are installed in conda env)

Warning! By default 20 cpus are used on the node. Don't forget to adjust -t option of circfull command and --cpus-per-task option for Slurm.

Example directory for use on cluster:
-------------------------------------

/usr/local/bioinfo/src/circfull/example_on_cluster

To submit: sbatch test_circfull-b61efc0.sh 

See software documentation and our FAQ (http://bioinfo.genotoul.fr/index.php/faq/) for more informations.