SOFT : graphtyper
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Site du soft: https://github.com/DecodeGenetics/graphtyper
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LICENSE:
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MIT

See software documentation for more informations.

Location: /usr/local/bioinfo/src/graphtyper
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Load binaries and environment:
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-> Version v2.7.5

module load bioinfo/graphtyper/2.7.5

Warning! By default 128 cpu are used on the node. Don't forget to adjust --threads option of graphtyper command and --cpus-per-task option for Slurm.

Example directory for use on cluster:
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/usr/local/bioinfo/src/graphtyper/example_on_cluster

To submit: sbatch test_graphtyper-v2.7.5.sh 

See software documentation and our FAQ (http://bioinfo.genotoul.fr/index.php/faq/) for more informations.