SOFT : pggb
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Site du soft: https://github.com/pangenome/pggb
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LICENSE:
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MIT

See software documentation for more informations.

Location: /usr/local/bioinfo/src/pggb
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Load binaries and environment:
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-> Version v0.5.4

#Need Miniconda
module load devel/Miniconda/Miniconda3
module load bioinfo/pggb/0.5.4

To unload module, unload  in order:

module unload bioinfo/pggb/0.5.4
module unload devel/Miniconda/Miniconda3

-> Version v0.7.9

#Need Miniconda
module load devel/Miniconda/Miniconda3
module load bioinfo/pggb/0.7.9

To unload module, unload  in order:

module unload bioinfo/pggb/0.7.9
module unload devel/Miniconda/Miniconda3


Warning! By default 64 cpu are used on the node. Don't forget to adjust -t option of pggb command and --cpus-per-task option for Slurm.

Example directory for use on cluster:
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/usr/local/bioinfo/src/pggb/example_on_cluster

To submit: sbatch test_pggb-v0.5.4.sh