SOFT : riboSeed
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Site du soft: https://github.com/nickp60/riboSeed
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LICENSE:
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MIT

See software documentation for more informations.

Location: /usr/local/bioinfo/src/riboSeed
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Load binaries and environment:
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-> Version v0.4.90

#Need Miniconda
module load devel/Miniconda/Miniconda3
module load bioinfo/riboSeed/0.4.90

To unload module, unload  in order:

module unload bioinfo/riboSeed/0.4.90
module unload devel/Miniconda/Miniconda3

Warning! By default all cpu are used on the node. Don't forget to adjust --cores option of ribo command and --cpus-per-task option for Slurm.

Example directory for use on cluster:
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/usr/local/bioinfo/src/riboSeed/example_on_cluster

To submit: sbatch test_riboSeed-v0.4.90.sh 

See software documentation and our FAQ (http://bioinfo.genotoul.fr/index.php/faq/) for more informations.