SOFT : souporcell
------

Site du soft: https://github.com/wheaton5/souporcell
-------------

LICENSE:
--------

MIT

See software documentation for more informations.

Location: /usr/local/bioinfo/src/souporcell
---------

Load binaries and environment:
------------------------------

-> Version v2.5

#Need Singularity
module load containers/singularity/3.9.9

module load bioinfo/souporcell/2.5

singularity exec -B path_to_your_working_dir -B /usr/local/bioinfo/src  $SOUPOR_HOME/souporcell_latest.sif souporcell_pipeline.py ...

Example directory for use on cluster:
-------------------------------------

/usr/local/bioinfo/src/souporcell/example_on_cluster

To submit: sbatch test_souporcell-v2.5.sh 

See software documentation and our FAQ (http://bioinfo.genotoul.fr/index.php/faq/) for more informations.