SOFT : vAMPirus
------

Site du soft: https://github.com/Aveglia/vAMPirus
-------------

LICENSE:
--------

MIT

See software documentation for more informations.

Location: /usr/local/bioinfo/src/vAMPirus
---------

Load binaries and environment:
------------------------------

-> Version v2.0.5

#Need Nextflow <=22.10, Miniconda3
module load bioinfo/Nextflow/21.10.6 devel/Miniconda/Miniconda3

module load bioinfo/vAMPirus/2.0.5

To unload module, unload  in order:

module unload bioinfo/vAMPirus/2.0.5
module unload devel/Miniconda/Miniconda3


Copy config file in your working directory and adapt it: /usr/local/bioinfo/src/vAMPirus/vAMPirus-v2.0.5/vampirus.config
Database path: /usr/local/bioinfo/src/vAMPirus/vAMPirus-v2.0.5/Databases

Example directory for use on cluster:
-------------------------------------

/usr/local/bioinfo/src/vAMPirus/example_on_cluster

To submit: sbatch test_vAMPirus-v2.0.5.sh

See software documentation and our FAQ (http://bioinfo.genotoul.fr/index.php/faq/) for more informations.