Index of /~formation/M2_Phylogenomique/scripts

[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory  -  
[ ]trimal_selection.pl2018-10-24 10:44 4.5K 
[ ]trimal_conservation.pl2018-10-05 17:13 2.7K 
[TXT]species_strain_names.txt2018-10-08 11:40 779  
[ ]short_PorthoMCL.sh2018-09-26 16:53 6.3K 
[ ]rnammer_loop.pl2018-10-04 17:51 3.7K 
[ ]retrieve_ncbi_entries_list.pl2018-10-10 09:58 16K 
[ ]prokkagff2panoct.pl2018-09-27 16:31 3.9K 
[ ]prokka_loop.pl2020-09-22 14:17 4.6K 
[ ]parse_mcl.pl2018-09-17 18:19 1.8K 
[ ]panoct_PS.csh2020-09-24 14:05 695  
[ ]panoct_P.csh2020-09-24 14:13 679  
[ ]pan_core_plot.R2018-10-05 13:53 1.9K 
[ ]new_genes_plot.R2018-10-05 13:53 1.4K 
[ ]myscript.sh2020-09-24 14:22 353  
[ ]muscle_loop.pl2018-10-05 11:08 4.2K 
[ ]index_fasta.pl2018-10-05 10:26 3.4K 
[ ]index_eggNoG.pl2023-11-14 16:46 1.6K 
[ ]genoplot_blastn_links.R2018-10-05 13:49 2.4K 
[ ]genoplot_OG_links.R2018-09-27 12:32 11K 
[ ]genbank2dna.pl2018-09-10 10:29 5.0K 
[ ]gc_freq.pl2018-10-26 14:34 1.8K 
[ ]fetch_eggNoG.pl2023-11-14 16:46 2.1K 
[ ]extract_sequences_from_matchtable.pl2023-11-15 16:54 3.5K 
[ ]extract_sequences_from_list.pl2019-10-23 09:23 3.1K 
[ ]essai.R2018-09-17 18:19 2.7K 
[ ]concat_aligments.pl2023-11-16 11:09 5.9K 
[ ]cat_blast_resutls.pl2018-09-11 16:29 2.8K 
[ ]blastp_intra.pl2018-10-09 15:23 2.5K 
[ ]blastp_inter.pl2018-10-08 12:02 2.8K 
[ ]blastn_genome_pair.pl2018-09-27 10:26 3.0K 
[ ]aa_to_dna_aln_loop.pl2018-10-05 16:06 4.6K 
[ ]aa_to_dna_aln.pl2023-11-15 17:18 3.6K 
[TXT]_trim.aln_trim.txt2018-10-09 09:50 0  
[ ]RunSLURM_PMauve_12GProchlo.csh2020-10-06 18:37 645  
[ ]RunSLURM_PMauve_6GProchlo.csh2020-09-24 10:47 539  
[ ]RunSLURM_Mauve_6GProchlo.csh2020-10-06 18:38 718  
[ ]RunSLURM_ANI.csh2020-09-24 14:51 525  
[ ]Mash_sketch.sh2018-10-19 09:12 334  
[ ]Mash_dist_allpairs.sh2018-10-19 09:12 710  
[ ]MCL_partition_inflate.R2018-09-27 15:30 3.0K 
[ ]MCL_OG_size.R2018-10-05 13:53 1.3K 
[ ]MCL_OG_paralogy.R2018-09-27 15:41 2.2K