FastQCFastQC Report
mar. 21 mars 2017
dataset_45.dat

Summary

[OK]Basic Statistics

MeasureValue
Filenamedataset_45.dat
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1776923
Sequences flagged as poor quality0
Sequence length33
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGGAATTCTCGGGTGCCAAGGAACTCCAGTCAC25154214.156043902859045RNA PCR Primer, Index 1 (100% over 33bp)
CTGACCTATGAATTGACAGCCTGGAATTCTCGG972135.4708617086953115No Hit
TAGCTTATCAGACTGATGTTGACTGGAATTCTC414332.3317273736678517No Hit
TTTGGCAATGGTAGAACTCACACCTGGAATTCT401682.2605368943955364No Hit
AAGCTGCCAGTTGAAGAACTGTTGGAATTCTCG316371.7804373065124377No Hit
TAGCTTATCAGACTGATGTTGACTTGGAATTCT300351.6902814584537427No Hit
CACCCGTAGAACCGACCTTGCGTGGAATTCTCG296231.6670953102638664No Hit
TACCCTGTAGATCCGAATTTGTTGGAATTCTCG281751.5856061292470185No Hit
TATGGCACTGGTAGAATTCACTTGGAATTCTCG234501.319697026826711No Hit
TATGGCACTGGTAGAATTCACTGTGGAATTCTC234361.318909148004725No Hit
TTTGGCAATGGTAGAACTCACACCGTGGAATTC219721.2365195340484647No Hit
CAACGGAATCCCAAAAGCAGCTGTGGAATTCTC219541.2355065469916253No Hit
TAGCTTATCAGACTGATGTTGATGGAATTCTCG188181.0590216908667398No Hit
GTTTCCGTAGTGTAGTGGTTATCACGTTCGCCT187131.053112599701844No Hit
TGTAAACATCCTCGACTGGAAGCTTGGAATTCT159270.8963247141266111No Hit
ATGGCACTGGTAGAATTCACTGTGGAATTCTCG156620.8814112935675885No Hit
GCATTGGTAGTTCAATGGTAGAATTCTCGCCTT147930.8325065295457371No Hit
TTCACAGTGGCTAAGTTCTGTGGAATTCTCGGG133830.7531558767599947No Hit
TAGCTTATCAGACTGATGTTGACCTGGAATTCT132660.7465714608905394No Hit
TTCACAGTGGCTAAGTTCTGCTGGAATTCTCGG126460.711679684488298No Hit
GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACT112400.6325541399374086No Hit
CACCCGTAGAACCGACCTTGCTGGAATTCTCGG112300.6319913693502757No Hit
GCATTGGTAGTTCAATGGTAGAATTCTCGCCTG109100.6139827105620221No Hit
TTTGGCAATGGTAGAACTCACACCGTTGGAATT95660.5383463436513569No Hit
TTTGGCAATGGTAGAACTCACACTGGAATTCTC95640.5382337895339303No Hit
TATTGCACTTGTCCCGGCCTGTTGGAATTCTCG83830.47177058319353177No Hit
AGGCAAGATGCTGGCATAGCTGTGGAATTCTCG76770.43203897974194716No Hit
TTGCTGTGATGACTATCTTAGGACACCTTTGGA76010.427761923279737No Hit
TGTAAACATCCCCGACTGGAAGCTTGGAATTCT75080.42252815681940076No Hit
CTGACCTATGAATTGACAGCCTTGGAATTCTCG73300.4125108403684346No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTCGCCTT68220.38392209454208204No Hit
CCACGTTCCCGTGGTGGAATTCTCGGGTGCCAA67950.3824026139568231No Hit
CTAGACTGAGGCTCCTTGAGGTGGAATTCTCGG67570.380264085725718No Hit
CACAAATGATGAACCTTTTGACGGGCGGACAGA64710.3641688469337163No Hit
GTAAATGATGAACTCACTTTTTTCCCCGTCATA62750.353138543425911No Hit
TCCCCGGCATCTCCACCATGGAATTCTCGGGTG59990.3376060752210422No Hit
TATTGCACTTGTCCCGGCCTGTAATGGAATTCT57980.3262943864196704No Hit
TTCAAGTAATCCAGGATAGGCTTGGAATTCTCG57200.32190477584003363No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGA53150.2991125670611501No Hit
TGTAAACATCCTTGACTGGAAGCTTGGAATTCT52450.29517317295121964No Hit
CATTGCACTTGTCTCGGTCTGATGGAATTCTCG52400.29489178765765317No Hit
TGTCTGAGCGTCGCTTGGAATTCTCGGGTGCCA49590.27907793415921794No Hit
CTGACCTATGAATTGACAGCCATGGAATTCTCG45980.2587619159637193No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTCGCCTG45770.2575800977307402No Hit
TAGCAGCACGTAAATATTGGCGTGGAATTCTCG44760.2518961148006976No Hit
CTAGACTGAGGCTCCTTGAGGATGGAATTCTCG44660.2513333442135647No Hit
TTTGGCAATGGTAGAACTCACACCGATGGAATT42650.24002165541219286No Hit
CACCCGTAGAACCGACCTTGCGATGGAATTCTC42290.23799568129851434No Hit
GCATTGGTAGTTCAATGGTAGAATTCTCGCCTC42100.23692641718296176No Hit
TCTTAGATCGATGTGGTGCTCCGGAGTTCTCTT39490.22223810485879242No Hit
TCCCTGAGACCCTAACTTGTGATGGAATTCTCG38070.2142467625215049No Hit
TATGGCACTGGTAGAATTCACTGATGGAATTCT37490.2109826931161339No Hit
TTTGGCAATGGTAGAACTCACATGGAATTCTCG34420.19370563609115307No Hit
ATGGCACTGGTAGAATTCACTTGGAATTCTCGG33990.1912857225664815No Hit
GCATGGGTGGTTCAGTGGTAGAATTCTCGCCTT33440.18819048433725039No Hit
ATGGCACTGGTAGAATTCACTGTTGGAATTCTC33360.18774026786754408No Hit
ACCCTGTAGATCCGAATTTGTGTGGAATTCTCG33070.18610823316485858No Hit
AGAGGATTCGAACCTGGAATTCTCGGGTGCCAA32660.1838008737576136No Hit
TACCCTGTAGAACCGAATTTGTTGGAATTCTCG32480.1827878867007743No Hit
TTCACAGTGGCTAAGTTCCGCTGGAATTCTCGG31000.17445888201120702No Hit
TGAGGTAGTAGGTTGTATGGTTTGGAATTCTCG30740.1729956784846614No Hit
TGAGGTAGTAGATTGTATAGTTTGGAATTCTCG29830.16787446614175178No Hit
TGAGGTAGTAGGTTGTATAGTTTGGAATTCTCG29240.16455411967766753No Hit
GGCCGTGATCGTATAGTGGTTAGTACTCTGCGT28200.1587013055714851No Hit
TGGCTCAGTTCAGCAGGAACAGTTGGAATTCTC28010.15763204145593251No Hit
TGGCTCAGTTCAGCAGGAACAGTGGAATTCTCG27150.15279221440658936No Hit
TCCCCGGCACCTCCACCATGGAATTCTCGGGTG26930.15155411911489694No Hit
TAGCTTATCAGACTGATGTTGACATGGAATTCT26900.15138528793875705No Hit
TACCCTGTAGATCCGAATTTGTGTGGAATTCTC25520.14361905383632267No Hit
TCCCTGAGACCCTTTAACCTGTGATGGAATTCT25490.1434502226601828No Hit
TATTGCACTTGTCCCGGCCTGTATGGAATTCTC24620.13855411855212635No Hit
ATGGCACTGGTAGAATTCACTGATGGAATTCTC23100.13000000562770586No Hit
ATGAGAGGTGTAGAATAAGTGGGAGGCCCCCGG22460.12639827387005514No Hit
ACAAATGATGAACCTTTTGACGGGCGGACAGAA22390.1260043344590621No Hit
AACATTCAACGCTGTCGGTGAGTTGGAATTCTC21690.12206494034913162No Hit
TGACCTATGAATTGACAGCCAGTTGGAATTCTC21410.12048918270515943No Hit
ACCCTGTAGATCCGAATTTGTTGGAATTCTCGG21200.11930736447218028No Hit
AGGCAAGATGCTGGCATAGCTGTTGGAATTCTC21200.11930736447218028No Hit
NGGAATTCTCGGGTGCCAAGGAACTCCAGTCAC21180.11919481035475371RNA PCR Primer, Index 1 (96% over 33bp)
TGAGGTAGTAGTTTGTGCTGTTTGGAATTCTCG21160.1190822562373271No Hit
ACCGGGTGCTGTAGGCTTTTGGAATTCTCGGGT20930.11778788388692137No Hit
TGGAATTCTCGGGTGCCAAGGNACTCCAGTCAC20900.1176190527107815RNA PCR Primer, Index 1 (96% over 33bp)
CAGTGCAATAGTATTGTCAAAGCTGGAATTCTC20800.11705628212364858No Hit
AGCAGCATTGTACAGGGCTATGATGGAATTCTC20530.11553680153838967No Hit
TATTGCACTTGTCCCGGCCTGTATTGGAATTCT20380.1146926456576903No Hit
TCCGGCTCGAAGGACCTGGAATTCTCGGGTGCC20380.1146926456576903No Hit
TTTGGCAATGGTAGAACTCACACCGGTGGAATT19890.11193506978073894No Hit
TATGGCACTGGTAGAATTCACTGTTGGAATTCT19880.11187879272202565No Hit
GTGAAATGATGGCAAATCATCTTTCGGGACTGA19870.11182251566331236No Hit
CGAGACATGGACTGAATTATTCCTTGGAATTCT19820.1115411303697459No Hit
TGACCTATGAATTGACAGCCAGTGGAATTCTCG19540.1099653727257737No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTCGCTGG18990.10687013449654263No Hit
TTCAAGTAATTCAGGATAGGTTTGGAATTCTCG18480.10400000450216469No Hit

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCACGCT2600.027.08108322
TTGCTAC257.6934876E-427.08108321
ATCACGC2600.027.08108321
AGCATAG257.6934876E-427.08108321
TACTCCA257.6934876E-427.08108322
CACCGGT2950.027.08108321
CACCGAA554.7293724E-1027.08108321
ACCGGTT405.925849E-727.08108122
CATCACG1450.027.08031720
GAGCATA257.6947623E-427.08031520
GTTTAGT307.018578E-527.07954819
TAGGTTT1700.027.07801217
GCCCTAC1100.027.07801217
TTGCGTT950.027.07801218
GCCACGC554.7475623E-1027.07801218
TGATAGA307.021288E-527.0780116
CTCACTC405.9317244E-727.0780117
TCCGCTT257.6985883E-427.0780117
CCCTACA1050.027.0780118
GGTTTCT900.027.0780118