FastQCFastQC Report
mar. 21 mars 2017
dataset_206.dat

Summary

[OK]Basic Statistics

MeasureValue
Filenamedataset_206.dat
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8281321
Sequences flagged as poor quality0
Sequence length10-50
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TAGCTTATCAGACTGATGTTGAC127243815.365157322122883No Hit
AACCCGTAGATCCGAACTTGTG6877428.304737855228653No Hit
AACCCGTAGATCCGAACTTGT2027662.4484741021390186No Hit
TAGCTTATCAGACTGATGTTGA2002962.418647942761789No Hit
TAGCTTATCAGACTGATGTT1963792.371348725644133No Hit
TTCAAGTAATCCAGGATAGGCT1653941.9971934429301799No Hit
TGAGGTAGTAGGTTGTATAGTT1250921.5105319549864085No Hit
TGAGGTAGTAGTTTGTGCTGTT1088931.3149230660180906No Hit
TAGCTTATCAGACTGATGTTGACA1047411.2647861373807392No Hit
TAGCTTATCAGACTGATGTTGACT1011741.2217132991222053No Hit
AACCCGTAGATCCGAACTTGTGT1010501.2202159534692594No Hit
TGAGGTAGTAGATTGTATAGTT802590.9691569738692656No Hit
AACCCGTAGATCCGAACTTGTGA613950.7413672287307785No Hit
TAGCTTATCAGACTGATGTTG594200.7175183765971637No Hit
TGAGATGAAGCACTGTAGCTCT576430.6960604473609947No Hit
TGAGATGAAGCACTGTAGCTC562550.6792998363425352No Hit
AAGCTGCCAGTTGAAGAACTGT548550.6623943209060487No Hit
TCCCTGAGACCCTAACTTGTGA538830.6506570630458595No Hit
AACCCGTAGATCCGAACTTGTA530120.6401394173707311No Hit
GGAAGAGCACACGTCTGAACTCCAGTCACGTGAAAATCTCGTATGCCGTC510750.6167494292275351TruSeq Adapter, Index 19 (98% over 50bp)
TGAGGTAGTAGTTTGTACAGTT467680.5647408185240013No Hit
CGCGACCTCAGATCAGAC446500.5391651887422308No Hit
CGCGACCTCAGATCAGACGT404490.48843656706460237No Hit
GAAGCGGGTGCTCTTATTTT401830.4852245191316699No Hit
ACAGTAGTCTGCACATTGGTT384290.4640443233633861No Hit
TAGCTTATCAGACTGATGTTGAA369960.4467403207773253No Hit
CCCAGTGTTCAGACTACCTGTTC363420.4388430299948523No Hit
TGCTCTGATGAAATCACTAATAGGAAGTGCCGTCAGAAGCGATAACTGAC342200.4132190987404063No Hit
AGCTACATTGTCTGCTGGGTTT334380.40377616083231166No Hit
ACAGTAGTCTGCACATTGGTTA326480.3942366199788657No Hit
TCCCTGAGACCCTAACTTGTGAA314580.37986693185785214No Hit
AACCCGTAGATCCGATCTTGT303110.36601648456810215No Hit
AACCCGTAGATCCGAACTTG303060.3659561077272575No Hit
TCCCTGAGACCCTAACTTGTG302240.36496592753740614No Hit
TTCACAGTGGCTAAGTTCTGC288950.3489177632409129No Hit
TGAGGTAGTAGGTTGTGTGGTT279140.3370718270672034No Hit
AGCTACATTGTCTGCTGGGTTTC261280.3155052195175142No Hit
TAGCTTATCAGACTGATGTTGACC233050.281416455176656No Hit
TCCCTGGTGGTCTAGTGGTTAGGATTCGGCGCT228380.27577725824177085No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAATT223870.2703312671975884No Hit
GAAGCGGGTGCTCTTATTT219170.2646558441581965No Hit
TGAGGTAGTAGGTTGTATAGT204460.24689297758171674No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAATTT202470.24448997931610186No Hit
TGAGGTAGTAGTTTGTGCTGTTA199210.24055340929303431No Hit
TCCCTGTGGTCTAGTGGTTAGGATTCGGCGCT186920.22571278181343293No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTCGCC186210.22485543067343963No Hit
AACCCGTAGATCCGAACTTGC181190.21879359585264235No Hit
AACCCGTAGATCCGATCTTGTG176120.21267138419100046No Hit
GGCTGGTCCGATGGTAGTGGGTTATCAGAACT171730.207370297564845No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGA171170.20669407694738554No Hit
TGTAAACATCCTCGACTGGAAGCT169450.2046171136223315No Hit
CGCGACCTCAGATCAGACG168020.2028903359741761No Hit
TTCAAGTAATCCAGGATAGGCC167900.20274543155614907No Hit
TCCCTGAGACCCTAACTTGT166170.2006563928629261No Hit
AGCTACATTGTCTGCTGGGTTTCT164520.19866395711505444No Hit
TATACAAGGGCAAGCTCTCTGT157860.19062176191455446No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTCGCCT148250.17901733310422335No Hit
AACCCGTAGATCCGATCTTGTGA145160.1752860443400274No Hit
TGAGGTAGTAGTTTGTGCTGTTT142590.17218267472061524No Hit
TATTGCACTTGTCCCGGCCTGT141040.1703109926544328No Hit
TGGCTCAGTTCAGCAGGAACAG134400.1622929481902706No Hit
TTCACAGTGGCTAAGTTCTGCA127930.15448018498498006No Hit
TCCCTGGTGGTCTAGTGGTTAGGATTCGGCG127180.15357453237231114No Hit
TACAGTAGTCTGCACATTGGTT126540.15280170880950034No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAA126300.15251189997344627No Hit
AGCTACATCTGGCTACTGGGTCTCT124420.15024173075768948No Hit
AACATTCAACGCTGTCGGTGAGT123910.14962588698107462No Hit
AGCTACATTGTCTGCTGGGTTTT121970.14728326555630436No Hit
TCAGTGCACTACAGAACTTTGT120710.14576176916702058No Hit
TGAGGTAGTAGATTGTATAGT120140.1450734731813922No Hit
TGAGGTAGTAGGTTGTGTGGTTT119220.14396253930985164No Hit
TGAGATGAAGCACTGTAGCTCA118300.14285160543831113No Hit
AGCTCGGTCTGAGGCCCCTCAGT118180.1427067010202841No Hit
TTCACAGTGGCTAAGTTCCG117740.14217538482085165No Hit
TCCCTGAGACCCTTTAACCTGT114120.13780410154370298No Hit
TGAGATGAAGCACTGTAGCTT113730.13733316218511515No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCTGAAT113450.13699505187638542No Hit
TGAGGTAGTAGGTTGTATAGTC111500.13464035508344624No Hit
CACCCGTAGAACCGACCTTGCG111490.1346282797152773No Hit
TCCCTGAGACCCTTTAACCTGTG110560.13350527047556784No Hit
TGAGGTAGTAGTTTGTGCTGT104800.12654985841027053No Hit
TGAGGTAGTAGTTTGTGCTGTC102810.12414686014465567No Hit
TCGGATCCGTCTGAGCTTGGCT102110.12330158437283134No Hit
GCATTGGTGGTTCAGTGGTAGAATTCTCGCCTG102010.12318083069114215No Hit
GAAGCGGGTGCTCTTAT100120.12089858610721646No Hit
GAAGCGGGTGCTCTTATT98410.11883369815033132No Hit
TGGCTCAGTTCAGCAGGAACAGT98100.11845936173709484No Hit
AACCCGTAGATCCGAACTTGTGC96900.11701031755682458No Hit
TGGCTCAGTTCAGCAGGAAC96190.11615296641683133No Hit
AGCTACATCTGGCTACTGGGTCTC95870.11576655463542591No Hit
TTCACAGTGGCTAAGTTCTG94980.11469184686839214No Hit
GTGCAATGATGTATTTTATTCAACACATCATTCTGAAAGAACGTGTGGAA94790.11446241487318266No Hit
AGCAGCATTGTACAGGGCTATGA93840.11331525489713537No Hit
TGAGAACTGAATTCCATAGGCTGT93730.11318242584727728No Hit
CGCGACCTCAGATCAGACGTGGC93700.11314619974277051No Hit
TCCCTGTGGTCTAGTGGTTAGGATTCGGCG92200.11133489451743267No Hit
TACCCTGTAGAACCGAATTTGT91770.11081565368616915No Hit
TGAGATGAAGCACTGTAGCT91030.10992207644166915No Hit
TTCACAGTGGCTAAGTTCTGT89990.10866623815210157No Hit
ACAGTAGTCTGCACATTGGTTT88870.10731379691718267No Hit
CTAGCACCATCTGAAATCGGTT87600.10578022515972994No Hit
TGTAAACATCCCCGACTGGAAGCT86660.10464514055185158No Hit
CGCGACCTCAGATCAGACGTGGCGACCCGCT84830.10243534817693942No Hit
AGCTACATCTGGCTACTGGGTCT83450.10076894736962859No Hit

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACGCATC102.2023791E-4462.330543
AAAGCTT300.0462.3304743
ATGCCGT57950.0447.5710443
TATGCCG58950.0444.7765842
GTCACAA1050.0443.3189444
TTACACA208.691131E-9437.0231341
AACTGAC39200.0430.4547744
CTAAATG1950.0429.6783444
AATGTAT3500.0427.1360542
CGAGTAT102.8137115E-4426.0448638
GATTATA2200.0423.168144
GTATGCC60950.0423.0412641
CGTATGC61250.0420.1230540
TAATGAA5400.0417.4689339
TCTCGTA61750.0410.0671737
AACCACA6150.0409.587940
CTCGTAT62900.0405.7247338
TCGTATG64300.0404.354139
AGCGATA38700.0403.476638
TATCGTA1100.0402.50937