MultAlin result page

Multalin result page

Multalin version 5.4.1
Copyright I.N.R.A. France 1989, 1991, 1994, 1996
Published research using this software should cite
Multiple sequence alignment with hierarchical clustering
F. CORPET, 1988, Nucl. Acids Res., 16 (22), 10881-10890
Symbol comparison table: blosum62
Gap weight: 12
Gap length weight: 2
Consensus levels: high=90% low=50%
Consensus symbols:
 ! is anyone of IV
 $ is anyone of LM
 % is anyone of FY
 # is anyone of NDQEBZ

 MSF:     48    Check:   0         ..
 Name: UniRef90_K3WPX Len:    48  Check: 9611  Weight:  0.82
 Name: UniRef90_G4YIR Len:    48  Check: 2519  Weight:  0.82
 Name: UniRef90_W2Q1I Len:    48  Check: 9264  Weight:  0.47
 Name: UniRef90_D0MY4 Len:    48  Check: 9308  Weight:  0.47
 Name: UniRef90_W0G9U Len:    48  Check: 9533  Weight:  0.96
 Name: UniRef90_K3W5W Len:    48  Check: 9963  Weight:  1.09
 Name: UniRef90_H3H2Y Len:    48  Check: 9564  Weight:  0.72
 Name: UniRef90_G4YIR Len:    48  Check:   86  Weight:  0.55
 Name: UniRef90_H3G5B Len:    48  Check: 9459  Weight:  0.55
 Name: tr|O42830|O428 Len:    48  Check: 3630  Weight:  0.98
 Name: UniRef90_A0A0W Len:    48  Check: 8894  Weight:  1.17
 Name: UniRef90_K3WFA Len:    48  Check: 9395  Weight:  1.17
 Name: UniRef90_G5AEI Len:    48  Check:  417  Weight:  1.23
 Name: UniRef90_M4B6K Len:    48  Check:  482  Weight:  1.00
 Name: UniRef90_D0MY5 Len:    48  Check: 7810  Weight:  0.90
 Name: UniRef90_A0A0P Len:    48  Check:  341  Weight:  0.90
 Name: UniRef90_H3H1Z Len:    48  Check:  413  Weight:  1.17
 Name: UniRef90_W2N69 Len:    48  Check:  356  Weight:  0.66
 Name: UniRef90_A0A0W Len:    48  Check:  356  Weight:  0.66
 Name: UniRef90_K3WD7 Len:    48  Check: 7298  Weight:  1.41
 Name: UniRef90_F0WDJ Len:    48  Check:  796  Weight:  1.39
 Name: UniRef90_F0WDJ Len:    48  Check: 9154  Weight:  1.39
 Name: UniRef90_D0N2D Len:    48  Check:   11  Weight:  1.21
 Name: UniRef90_G4YTG Len:    48  Check:  585  Weight:  1.21
 Name: UniRef90_A0A02 Len:    48  Check:  508  Weight:  2.11
 Name: Consensus      Len:    48  Check: 1400  Weight:  0.00

//

if the alignment is not visible, try to decrease line length and/or text size (see options)

Available files:
-Sequence Input file
-Cluster file
-Results as a fasta file
-Results as a text page (msf)
-Results as postscript page(s) with ESPript (protein only

)
-Alignment and tree description (rfd) Get a better view of your protein family : phylogenetic tree, pruned tree and subtrees, summarised coloured alignment and subalignments.
- Results as an html page (needs to enable style sheets)
-Results as a text page with colour indications (need a text editor)

-Results as a gif image

Add one sequence to the alignment

Cut and paste your sequence here below (FASTA/MULTALIN FORMAT ONLY).

Presentation options for a result page as a coloured

Font options

Text size (for Image only): Text colour (for Image only): Background colour: High consensus colour: Low consensus colour: Neutral colour:

Consensus levels

High consensus value: % (default: 90%)
Low consensus value: % (default: 50 %) must be less than first value.

Other options

Output style: Maximum line length: Graduation step: