Java memory size is set to 1200M Launching application... QualiMap v.2.2.2-dev Built on 2019-11-11 14:05 Selected tool: --version No proper tool name is provided. usage: qualimap [options] To launch GUI leave empty. Available tools: bamqc Evaluate NGS mapping to a reference genome rnaseq Evaluate RNA-seq alignment data counts Counts data analysis (further RNA-seq data evaluation) multi-bamqc Compare QC reports from multiple NGS mappings clustering Cluster epigenomic signals comp-counts Compute feature counts