FastQCFastQC Report
mar. 10 mai 2022
SRR746797_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR746797_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences25329795
Sequences flagged as poor quality0
Sequence length100
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTGGAAT108600.09.8087341
CCCGAAT91900.09.2831941
CGGGAAT122100.09.2646681
CTAGAAT40850.09.1152671
AATCCAA150050.09.0793645
CTTGAAT118350.08.9210111
CATTCTA71750.08.91365054
ATCCAAC160950.08.7563626
CGAGAAT139000.08.7486141
CTCGAAT101100.08.718161
CTTAAAT30800.08.5698191
CTCGGAT143250.08.5219591
TTGAATC77450.08.5200272
CTCGATT105050.08.3903471
TTCAGTC90700.08.3666752
CTCAGAT68950.08.3398821
AATCTAA43800.08.2586695
CGCGAAT75800.08.145851
CGGAAAT110950.07.9441721
AATTGAC83150.07.9096855
Produced by FastQC (version 0.11.5)