FastQCFastQC Report
mar. 10 mai 2022
SRR6148374_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR6148374_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15547444
Sequences flagged as poor quality0
Sequence length35-101
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGTTATC64950.026.17562794-95
GTCGGAA70200.025.8897251
CCCCCCT24650.024.6386091
CTCCGTT131250.024.4937251
CCCCACT26950.022.366431
CGGAACT70300.021.1024783
GTCCGTT81500.020.226981
TCCGTTG100150.020.0544132
CTCCTAT99100.019.3994711
GGACGCC33850.019.31961680-81
CCGTTGT90550.018.7525333
GCCGTCT45250.018.64009750-51
CTCCGAT65850.017.960791
CGGAAGA86500.017.9418334
GAGCACA85550.017.6065489
GTCCTGT64400.017.230661
TCGGAAC88300.017.16272
GTCCCTT72300.017.0532421
GTATGCC52400.017.02389546-47
CTCCGCT63550.016.9581281
Produced by FastQC (version 0.11.5)