SRR12596370_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR12596370_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	23331551
Sequences flagged as poor quality	0
Sequence length	150
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAAAAAGAAAACGCAGCAATGAGTCTCTCTGATAAGGACAAGGCTGTTGT	58809	0.25205782504557883	No Hit
GGACACCCTAAAACGTAGACATGGTTGAGTGGACAGATGCTGAGCGAAGT	55577	0.23820533834205876	No Hit
GCCAGATCAACAAGATTTCATGGCGTTTCCTCTGTGGGAGATGCTGTGGA	51001	0.21859241162321355	No Hit
AGACAATCTAACTTGAGAAAAAGAAAACGCAGCAATGAGTCTCTCTGATA	45577	0.19534492156136557	No Hit
AGAAAACGCAGCAATGAGTCTCTCTGATAAGGACAAGGCTGTTGTGAAAG	43963	0.18842725029296165	No Hit
GAAAACGCAGCAATGAGTCTCTCTGATAAGGACAAGGCTGTTGTGAAAGC	43012	0.18435122465711773	No Hit
AAACAAGTGCCTAAGGACACCCTAAAACGTAGACATGGTTGAGTGGACAG	41372	0.17732211630508404	No Hit
TCGGGATCCACATGCAATTTCTCAGAGTGCATCACACTGAGTGGCGCATA	39560	0.16955580878442242	No Hit
GTCGGGATCCACATGCAATTTCTCAGAGTGCATCACACTGAGTGGCGCAT	29698	0.12728686575530276	No Hit
CTTAAACAAGTGCCTAAGGACACCCTAAAACGTAGACATGGTTGAGTGGA	28567	0.12243935261740636	No Hit
CTAAAACGTAGACATGGTTGAGTGGACAGATGCTGAGCGAAGTGCCATCA	26642	0.11418872238712291	No Hit
GCAGCAATGAGTCTCTCTGATAAGGACAAGGCTGTTGTGAAAGCCCTATG	24092	0.10325931610804613	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CAATCTA	14775	63.057583	4
ATCTAAC	14470	50.52787	6
AATCTAA	17375	43.88354	5
TCTAACT	16635	43.734077	7
CTAACTT	17160	41.892338	8
GACAATC	18550	40.04642	2
GGACTTA	9770	39.132362	3
TAACTTG	18470	39.03985	9
CCGCGAT	7465	36.785713	1
AGACAAT	19895	36.408783	1
GTGCCTA	18590	33.555202	7
GACTTAA	11845	32.763042	4
GCCTAAG	19050	32.368286	9
ACAATCT	30950	32.196716	3
CTTAAAC	22365	32.033287	1
GCCAGAT	27960	31.990328	1
CGCGATC	9060	30.697859	2
TGCCTAA	22455	27.779615	8
GATCAAC	29215	27.700714	5
GTCGGTT	17750	27.489975	1