SRR12596370_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR12596370_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	23331551
Sequences flagged as poor quality	0
Sequence length	150
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGACACCCTAAAACGTAGACATGGTTGAGTGGACAGATGCTGAGCGAAGT	52022	0.22296846017652236	No Hit
GAAAAAGAAAACGCAGCAATGAGTCTCTCTGATAAGGACAAGGCTGTTGT	51538	0.22089401600433678	No Hit
GCCAGATCAACAAGATTTCATGGCGTTTCCTCTGTGGGAGATGCTGTGGA	46284	0.19837515302776054	No Hit
AGACAATCTAACTTGAGAAAAAGAAAACGCAGCAATGAGTCTCTCTGATA	43411	0.1860613552866674	No Hit
AAACAAGTGCCTAAGGACACCCTAAAACGTAGACATGGTTGAGTGGACAG	40866	0.17515337921598098	No Hit
CTTAAACAAGTGCCTAAGGACACCCTAAAACGTAGACATGGTTGAGTGGA	40544	0.17377327379564264	No Hit
AGAAAACGCAGCAATGAGTCTCTCTGATAAGGACAAGGCTGTTGTGAAAG	38619	0.1655226435653592	No Hit
GAAAACGCAGCAATGAGTCTCTCTGATAAGGACAAGGCTGTTGTGAAAGC	36735	0.1574477410438766	No Hit
CTAAAACGTAGACATGGTTGAGTGGACAGATGCTGAGCGAAGTGCCATCA	35994	0.15427178416042722	No Hit
TCGGGATCCACATGCAATTTCTCAGAGTGCATCACACTGAGTGGCGCATA	35167	0.1507272276926639	No Hit
CTTGAAGTTGGCCGGGTCAATACGCAGCTTGAAAGCATGAAGTTCGCTCA	32204	0.13802768620054448	No Hit
CGAGGATCTTGAAGTTGGCCGGGTCAATACGCAGCTTGAAAGCATGAAGT	25928	0.11112848862898142	No Hit
GTCGGGATCCACATGCAATTTCTCAGAGTGCATCACACTGAGTGGCGCAT	25158	0.10782823653686804	No Hit
CCACGATCACATTGTGTGCGAGGATCTTGAAGTTGGCCGGGTCAATACGC	24370	0.10445083569454942	No Hit
CAGCAATGAGTCTCTCTGATAAGGACAAGGCTGTTGTGAAAGCCCTATGG	23864	0.10228209860544633	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CAATCTA	14545	61.08052	4
ATCTAAC	14340	48.19634	6
GGACTTA	10390	45.178654	3
AATCTAA	16650	42.721252	5
CCGCGAT	7345	42.25906	1
TCTAACT	16720	40.86134	7
CTAACTT	17310	39.26066	8
GACTTAA	12185	39.232304	4
GACAATC	18155	38.664337	2
CTTAAAC	25015	38.49154	1
TAACTTG	18190	37.084255	9
AGACAAT	19530	34.551884	1
CGCGATC	8935	34.486683	2
ACAATCT	30220	31.280344	3
GCCAGAT	28020	29.91708	1
GCCTAAG	20460	28.958553	9
GTGCCTA	20375	28.938028	7
TAAACAA	32855	27.917032	3
GATCAAC	28250	27.4982	5
GTCGGTT	18565	26.3396	1