FastQCFastQC Report
ven. 13 mai 2022
SRR2045416_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR2045416_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences36457070
Sequences flagged as poor quality0
Sequence length100
%GC50

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACTTAGG149250.019.40302732-33
TTAGGCA164000.017.24203334-35
CTCGTAT182450.016.14541242-43
TCGGAAG301000.016.0017953
TATGCCG186800.015.97956246-47
ATCGGAA324650.014.7631822
CGGAAGA351900.014.23465254
TCACTTA208700.014.02478630-31
CTTAGGC169700.013.75167632-33
CACTTAG171900.013.72850930-31
GATCGGA363200.013.2135661
CGTATGC233400.012.99149844-45
AGAGCAC384150.012.8956258
AGTCACT238650.012.22078728-29
GAGCACA434200.011.7452619
TAGGCAT193150.011.59498334-35
ATCTCGT252400.011.27154940-41
CGTCTGA285750.010.85300616-17
CACGTCT284550.010.76064214-15
TCTCGTA227300.010.57316640-41
Produced by FastQC (version 0.11.5)