FastQCFastQC Report
ven. 13 mai 2022
SRR2045416_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR2045416_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences36457070
Sequences flagged as poor quality0
Sequence length100
%GC50

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGGAT85650.09.573351
CCGGGAT117450.08.9361051
CGGGAAT68900.08.9085151
CCGAAAC119400.08.5939541
CCGCGAT55150.08.410911
GATCGGA310050.08.18197394
CCGTATC108450.08.12462848-49
AGATCGG359650.08.07432494
CTGGGAT208850.07.9867261
CGCCGAT88300.07.95946361
CTGGAAT166250.07.8349531
CGGGGAT179050.07.7720461
CGCAGAT127050.07.74458031
CGCAAAT73850.07.6134941
CGACGAT81300.07.60740661
CGGGCAT140900.07.54862931
CCGGAAT67150.07.4660521
CTCGCAT64450.07.3426311
CCGAAAT70850.07.3406811
CCGGTAT62000.07.33049441
Produced by FastQC (version 0.11.5)