FastQCFastQC Report
ven. 13 mai 2022
SRR2045417_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR2045417_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences35480430
Sequences flagged as poor quality0
Sequence length100
%GC49

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCCGTA159750.020.70166446-47
CCGTATC178150.018.71092448-49
TCTCGGT223450.017.63338536-37
GATCTCG266950.016.58140234-35
TAGATCT256300.014.93911332-33
TCGTGTA235050.014.70810814-15
GTATCAT224650.014.67227650-51
TGGTCGC239150.014.16837642-43
TCGGTGG317950.013.73300938-39
GTCGCCG258400.013.32128744-45
AGTGTAG246000.012.93469928-29
CGTATCA164950.012.87544750-51
AGACGGC181800.012.65889559
GTAGGGA289150.012.59079618-19
CGGCATA80250.012.14976512-13
GCCGTAT179950.011.99671648-49
GTGTAGG327400.011.63986516-17
ATCATTA327100.011.46556252-53
CGTCGTG332500.011.26431412-13
AGAGCGT416300.011.13520059
Produced by FastQC (version 0.11.5)