FastQCFastQC Report
lun. 3 janv. 2022
SRR15718796_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15718796_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20169850
Sequences flagged as poor quality0
Sequence length150
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG225980.11203851292895088No Hit

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGGGT58850.010.2801021
CCCACAC206950.010.266471
CGGGAAT75550.010.2003211
CTGGAAT253250.010.1811811
GTCCGTT38000.010.045161
CCCGGTT62050.09.9820851
CCCGGGT34900.09.9055921
CCCGTAT48850.09.8781321
GTTTAAG172400.09.6502671
CGATTGA130750.09.4715974
CTCGGCT151350.09.326921
CTAGAGT95550.09.1929038
CTAGAAT132850.08.9451361
GGGGGAT143550.08.8804441
AATCTAG135100.08.6869785
CTGAAAT377700.08.6571211
CGACTAA54100.08.6504698
CCCGAAT87450.08.647571
CTCGAAT183750.08.6230311
CCGGTAT51500.08.5307491
Produced by FastQC (version 0.11.5)