FastQCFastQC Report
lun. 3 janv. 2022
SRR15718799_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR15718799_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18291366
Sequences flagged as poor quality0
Sequence length150
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG214490.11726297532945326No Hit

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACGTAT65450.018.7086771
GTCACGT47400.017.4752461
CGTATTC91700.015.46987153
GTTTAAG131950.015.2299541
ACGTATT83000.014.0581332
TCACGTA58650.013.8771772
GTCGGTT44000.013.0960731
CTGGCAT134200.012.2909871
CTGTAAT282650.012.0535761
CCCGTAT41350.011.4966741
CTCCCCT129650.011.3889881
TAATTGG306000.011.2001914
CCCGTGT28450.011.1397181
CGGGGAT53250.011.0916981
GCATCTA105850.011.0875784
CCCGGGT22300.010.9819091
CCCGGTT94950.010.6961611
GTAATTG318200.010.4325513
CTCGGTT62300.010.4053871
AATTGGC357800.010.3031395
Produced by FastQC (version 0.11.5)