#Starting miRDeep2
/usr/local/bioinfo/src/galaxy/galaxy-dist/tools/sm_mirdeep2/miRDeep2.pl tests/reads.fa bank/Oncorhynchus_mykiss_V1.0.fa tests/mapped.arf none none none

miRDeep2 started at 16:31:55


mkdir mirdeep_runs/run_29_11_2012_t_16_31_55

#testing input files
sanity_check_reads_ready_file.pl tests/reads.fa

started: 16:31:59

ended: 16:31:59
total:0h:0m:0s

started: 16:31:59
sanity_check_genome.pl bank/Oncorhynchus_mykiss_V1.0.fa