Sample	Filename	File type	Encoding	Total Sequences	Sequences flagged as poor quality	Sequence length	%GC	total_deduplicated_percentage	avg_sequence_length	median_sequence_length	basic_statistics	per_base_sequence_quality	per_tile_sequence_quality	per_sequence_quality_scores	per_base_sequence_content	per_sequence_gc_content	per_base_n_content	sequence_length_distribution	sequence_duplication_levels	overrepresented_sequences	adapter_content
L0_2_EG5_S82_R1_001	L0_2_EG5_S82_R1_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	327077.0	0.0	76.0	51.0	33.35374296993429	76.0	76	pass	pass	pass	pass	warn	fail	pass	pass	fail	pass	fail
L0_2_EG5_S82_R2_001	L0_2_EG5_S82_R2_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	327077.0	0.0	76.0	51.0	34.49654370772125	76.0	76	pass	pass	pass	pass	fail	fail	pass	pass	fail	fail	fail
L0_8_SH2_S88_R1_001	L0_8_SH2_S88_R1_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	72217.0	0.0	76.0	50.0	56.366229558137285	76.0	76	pass	pass	pass	pass	warn	warn	pass	pass	warn	pass	fail
L0_8_SH2_S88_R2_001	L0_8_SH2_S88_R2_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	72217.0	0.0	76.0	53.0	54.909508841408524	76.0	76	pass	pass	pass	pass	fail	fail	pass	pass	warn	fail	fail
L10_11_SCO_1338_S63_R1_001	L10_11_SCO_1338_S63_R1_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	3856368.0	0.0	76.0	54.0	24.44469066950471	76.0	76	pass	pass	pass	pass	pass	fail	pass	pass	fail	pass	fail
L10_11_SCO_1338_S63_R2_001	L10_11_SCO_1338_S63_R2_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	3856368.0	0.0	76.0	54.0	24.974983420106568	76.0	76	pass	pass	pass	pass	warn	fail	pass	pass	fail	warn	fail
L10_13_SCO_2764_S65_R1_001	L10_13_SCO_2764_S65_R1_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	1654150.0	0.0	76.0	48.0	21.73994769521087	76.0	76	pass	pass	pass	pass	warn	warn	pass	pass	fail	pass	fail
L10_13_SCO_2764_S65_R2_001	L10_13_SCO_2764_S65_R2_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	1654150.0	0.0	76.0	51.0	23.846534269416193	76.0	76	pass	pass	pass	pass	fail	fail	pass	pass	fail	fail	fail
L2_10_MPHB2_S78_R1_001	L2_10_MPHB2_S78_R1_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	3741028.0	0.0	76.0	46.0	24.93287450486676	76.0	76	pass	pass	pass	pass	pass	warn	pass	pass	fail	pass	fail
L2_10_MPHB2_S78_R2_001	L2_10_MPHB2_S78_R2_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	3741028.0	0.0	76.0	47.0	28.040542469779805	76.0	76	pass	pass	pass	pass	warn	fail	pass	pass	fail	warn	fail
L2_11_MPHB3_S79_R1_001	L2_11_MPHB3_S79_R1_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	1446321.0	0.0	76.0	49.0	32.64271965444072	76.0	76	pass	pass	pass	pass	pass	fail	pass	pass	fail	pass	fail
L2_11_MPHB3_S79_R2_001	L2_11_MPHB3_S79_R2_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	1446321.0	0.0	76.0	49.0	33.59489721457141	76.0	76	pass	pass	pass	pass	warn	fail	pass	pass	fail	warn	fail
L2_12_MPHB4_S80_R1_001	L2_12_MPHB4_S80_R1_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	1293379.0	0.0	76.0	50.0	21.393860383800202	76.0	76	pass	pass	pass	pass	pass	fail	pass	pass	fail	pass	fail
L2_12_MPHB4_S80_R2_001	L2_12_MPHB4_S80_R2_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	1293379.0	0.0	76.0	55.0	23.30257781663253	76.0	76	pass	pass	pass	pass	fail	fail	pass	pass	fail	fail	fail
L2_1_EG1_S71_R1_001	L2_1_EG1_S71_R1_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	726506.0	0.0	76.0	57.0	34.81194484641608	76.0	76	pass	pass	pass	pass	warn	warn	pass	pass	fail	pass	fail
L2_1_EG1_S71_R2_001	L2_1_EG1_S71_R2_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	726506.0	0.0	76.0	56.0	37.878702517114654	76.0	76	pass	pass	pass	pass	fail	warn	pass	pass	fail	warn	fail
L2_2_EG2_S72_R1_001	L2_2_EG2_S72_R1_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	309416.0	0.0	76.0	59.0	52.31350259689567	76.0	76	pass	pass	pass	pass	warn	pass	pass	pass	warn	pass	fail
L2_2_EG2_S72_R2_001	L2_2_EG2_S72_R2_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	309416.0	0.0	76.0	60.0	52.85717333283807	76.0	76	pass	pass	pass	pass	warn	warn	pass	pass	warn	warn	fail
L2_3_EG3_S73_R1_001	L2_3_EG3_S73_R1_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	816287.0	0.0	76.0	52.0	35.99592731530271	76.0	76	pass	pass	pass	pass	warn	warn	pass	pass	fail	pass	fail
L2_3_EG3_S73_R2_001	L2_3_EG3_S73_R2_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	816287.0	0.0	76.0	52.0	36.96335476633933	76.0	76	pass	pass	pass	pass	fail	fail	pass	pass	fail	warn	fail
L4_11_MD2_S21_R1_001	L4_11_MD2_S21_R1_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	1161830.0	0.0	76.0	51.0	45.42688425526533	76.0	76	pass	pass	pass	pass	warn	fail	pass	pass	fail	pass	fail
L4_11_MD2_S21_R2_001	L4_11_MD2_S21_R2_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	1161830.0	0.0	76.0	51.0	45.31819453952041	76.0	76	pass	pass	pass	pass	fail	fail	pass	pass	fail	warn	fail
L4_13_MB5_S23_R1_001	L4_13_MB5_S23_R1_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	1887203.0	0.0	76.0	49.0	37.97018481484262	76.0	76	pass	pass	pass	pass	warn	pass	pass	pass	fail	pass	fail
L4_13_MB5_S23_R2_001	L4_13_MB5_S23_R2_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	1887203.0	0.0	76.0	49.0	38.531158096348335	76.0	76	pass	pass	pass	pass	fail	fail	pass	pass	fail	warn	fail
L4_4_MB9_S14_R1_001	L4_4_MB9_S14_R1_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	2893020.0	0.0	76.0	53.0	24.289558849664207	76.0	76	pass	pass	pass	pass	warn	fail	pass	pass	fail	pass	fail
L4_4_MB9_S14_R2_001	L4_4_MB9_S14_R2_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	2893020.0	0.0	76.0	53.0	26.24489288572495	76.0	76	pass	pass	pass	pass	fail	fail	pass	pass	fail	warn	fail
L4_5_MD5_S15_R1_001	L4_5_MD5_S15_R1_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	1459389.0	0.0	76.0	53.0	27.571146329085916	76.0	76	pass	pass	pass	pass	warn	warn	pass	pass	fail	pass	fail
L4_5_MD5_S15_R2_001	L4_5_MD5_S15_R2_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	1459389.0	0.0	76.0	54.0	28.150178186524055	76.0	76	pass	pass	pass	pass	fail	fail	pass	pass	fail	warn	fail
L4_8_MB4_S18_R1_001	L4_8_MB4_S18_R1_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	2520646.0	0.0	76.0	50.0	44.28791966718429	76.0	76	pass	pass	pass	pass	pass	warn	pass	pass	fail	pass	fail
L4_8_MB4_S18_R2_001	L4_8_MB4_S18_R2_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	2520646.0	0.0	76.0	50.0	44.88271450987963	76.0	76	pass	pass	pass	pass	warn	fail	pass	pass	fail	warn	fail
L4_9_MD12_S19_R1_001	L4_9_MD12_S19_R1_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	1735288.0	0.0	76.0	50.0	48.74925851694294	76.0	76	pass	pass	pass	pass	warn	warn	pass	pass	fail	pass	fail
L4_9_MD12_S19_R2_001	L4_9_MD12_S19_R2_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	1735288.0	0.0	76.0	50.0	49.3496265794508	76.0	76	pass	pass	pass	pass	fail	warn	pass	pass	fail	warn	fail
L5_12_MD9_S37_R1_001	L5_12_MD9_S37_R1_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	1729303.0	0.0	76.0	51.0	50.31203083548339	76.0	76	pass	pass	pass	pass	warn	warn	pass	pass	warn	pass	fail
L5_12_MD9_S37_R2_001	L5_12_MD9_S37_R2_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	1729303.0	0.0	76.0	50.0	50.45213309184944	76.0	76	pass	pass	pass	pass	fail	fail	pass	pass	warn	warn	fail
L5_13_BC11_S38_R1_001	L5_13_BC11_S38_R1_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	2181421.0	0.0	76.0	48.0	39.418370040899816	76.0	76	pass	pass	pass	pass	warn	warn	pass	pass	fail	pass	fail
L5_13_BC11_S38_R2_001	L5_13_BC11_S38_R2_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	2181421.0	0.0	76.0	48.0	39.13517635930203	76.0	76	pass	pass	pass	pass	fail	fail	pass	pass	fail	warn	fail
L5_14_BC12_S39_R1_001	L5_14_BC12_S39_R1_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	961972.0	0.0	76.0	49.0	54.55146275317701	76.0	76	pass	pass	pass	pass	pass	warn	pass	pass	warn	pass	fail
L5_14_BC12_S39_R2_001	L5_14_BC12_S39_R2_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	961972.0	0.0	76.0	49.0	54.97370170999911	76.0	76	pass	pass	pass	pass	warn	warn	pass	pass	warn	warn	fail
L5_15_BC13_S40_R1_001	L5_15_BC13_S40_R1_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	1450385.0	0.0	76.0	51.0	37.100690282652046	76.0	76	pass	pass	pass	pass	warn	fail	pass	pass	fail	pass	fail
L5_15_BC13_S40_R2_001	L5_15_BC13_S40_R2_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	1450385.0	0.0	76.0	51.0	37.700925739662495	76.0	76	pass	pass	pass	pass	warn	fail	pass	pass	fail	warn	fail
L5_1_MD15_S26_R1_001	L5_1_MD15_S26_R1_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	1551279.0	0.0	76.0	49.0	61.04424184268662	76.0	76	pass	pass	pass	pass	warn	warn	pass	pass	warn	pass	fail
L5_1_MD15_S26_R2_001	L5_1_MD15_S26_R2_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	1551279.0	0.0	76.0	50.0	60.947219499875885	76.0	76	pass	pass	pass	pass	fail	fail	pass	pass	warn	fail	fail
L5_2_MD7_S27_R1_001	L5_2_MD7_S27_R1_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	1383581.0	0.0	76.0	52.0	46.05041201629297	76.0	76	pass	pass	pass	pass	warn	fail	pass	pass	fail	pass	fail
L5_2_MD7_S27_R2_001	L5_2_MD7_S27_R2_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	1383581.0	0.0	76.0	52.0	46.62324890584348	76.0	76	pass	pass	pass	pass	fail	fail	pass	pass	fail	warn	fail
L5_3_MD8_S28_R1_001	L5_3_MD8_S28_R1_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	1280233.0	0.0	76.0	50.0	49.045947773041675	76.0	76	pass	pass	pass	pass	warn	warn	pass	pass	fail	pass	fail
L5_3_MD8_S28_R2_001	L5_3_MD8_S28_R2_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	1280233.0	0.0	76.0	51.0	49.16670598972971	76.0	76	pass	pass	pass	pass	fail	fail	pass	pass	fail	fail	fail
L5_4_MD4_S29_R1_001	L5_4_MD4_S29_R1_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	730114.0	0.0	76.0	53.0	39.41672290876522	76.0	76	pass	pass	pass	pass	warn	fail	pass	pass	fail	pass	fail
L5_4_MD4_S29_R2_001	L5_4_MD4_S29_R2_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	730114.0	0.0	76.0	54.0	39.60701782014228	76.0	76	pass	pass	pass	pass	fail	warn	pass	pass	fail	fail	fail
L5_5_MD10_S30_R1_001	L5_5_MD10_S30_R1_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	2037194.0	0.0	76.0	49.0	39.45999261881575	76.0	76	pass	pass	pass	pass	warn	warn	pass	pass	fail	pass	fail
L5_5_MD10_S30_R2_001	L5_5_MD10_S30_R2_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	2037194.0	0.0	76.0	50.0	40.6535554049034	76.0	76	pass	pass	pass	pass	warn	fail	pass	pass	fail	warn	fail
L5_6_MB8_S31_R1_001	L5_6_MB8_S31_R1_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	2866330.0	0.0	76.0	56.0	24.331276091431942	76.0	76	pass	pass	pass	pass	warn	fail	pass	pass	fail	pass	fail
L5_6_MB8_S31_R2_001	L5_6_MB8_S31_R2_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	2866330.0	0.0	76.0	56.0	25.410278653487374	76.0	76	pass	pass	pass	pass	fail	warn	pass	pass	fail	warn	fail
L5_7_MD3_S32_R1_001	L5_7_MD3_S32_R1_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	1482013.0	0.0	76.0	50.0	32.74475286179388	76.0	76	pass	pass	pass	pass	warn	warn	pass	pass	fail	pass	fail
L5_7_MD3_S32_R2_001	L5_7_MD3_S32_R2_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	1482013.0	0.0	76.0	52.0	33.5305801779703	76.0	76	pass	pass	pass	pass	fail	fail	pass	pass	fail	fail	fail
L5_8_MD16_S33_R1_001	L5_8_MD16_S33_R1_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	1860749.0	0.0	76.0	47.0	36.06236607066818	76.0	76	pass	pass	pass	pass	warn	pass	pass	pass	fail	pass	fail
L5_8_MD16_S33_R2_001	L5_8_MD16_S33_R2_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	1860749.0	0.0	76.0	47.0	36.16655987661371	76.0	76	pass	pass	pass	pass	warn	fail	pass	pass	fail	warn	fail
L8_15_HTMK99-XXII-0-4287_S49_R1_001	L8_15_HTMK99-XXII-0-4287_S49_R1_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	2791558.0	0.0	76.0	49.0	20.960650043402715	76.0	76	pass	pass	pass	pass	warn	warn	pass	pass	fail	pass	fail
L8_15_HTMK99-XXII-0-4287_S49_R2_001	L8_15_HTMK99-XXII-0-4287_S49_R2_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	2791558.0	0.0	76.0	49.0	22.263759840621	76.0	76	pass	pass	pass	pass	fail	fail	pass	pass	fail	warn	fail
L9_1_26-52_S50_R1_001	L9_1_26-52_S50_R1_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	5597920.0	0.0	76.0	47.0	25.499750564177003	76.0	76	pass	pass	pass	pass	pass	pass	pass	pass	fail	pass	fail
L9_1_26-52_S50_R2_001	L9_1_26-52_S50_R2_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	5597920.0	0.0	76.0	48.0	27.235529646516373	76.0	76	pass	pass	pass	pass	warn	fail	pass	pass	fail	warn	fail
L9_2_2777-17_S51_R1_001	L9_2_2777-17_S51_R1_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	1202390.0	0.0	76.0	46.0	33.4284477179849	76.0	76	pass	pass	pass	pass	pass	warn	pass	pass	fail	pass	fail
L9_2_2777-17_S51_R2_001	L9_2_2777-17_S51_R2_001.fastq.gz	Conventional base calls	Sanger / Illumina 1.9	1202390.0	0.0	76.0	47.0	35.32269739941506	76.0	76	pass	pass	pass	pass	warn	fail	pass	pass	fail	warn	fail